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| author | Luis Pedro Coelho <luis@luispedro.org> | 2022-07-24 17:17:04 +0200 |
|---|---|---|
| committer | github-actions[bot] <github-actions[bot]@users.noreply.github.com> | 2022-08-02 21:26:01 +0000 |
| commit | ec24d988f678f3636da709929f34844bba137cdc (patch) | |
| tree | 1713ae1e9fbc63bc3eda1620a0f32e74e18656d4 | |
| parent | Merge pull request #184879 from NixOS/backport-184674-to-release-22.05 (diff) | |
| download | nixpkgs-origin/backport-182705-to-release-22.05.tar.gz | |
samtools: Fix cross-compilationorigin/backport-182705-to-release-22.05
Tests require bgzip which comes from the htslib package.
This did not cause problems prior to
41485e7337baca768dc542c553a9d66030df7b33 as tests were not run in
cross-compilation.
(cherry picked from commit 5877d8e072d382ec5da6d83219e52df0a90f9f52)
| -rw-r--r-- | pkgs/applications/science/biology/samtools/default.nix | 3 |
1 files changed, 3 insertions, 0 deletions
diff --git a/pkgs/applications/science/biology/samtools/default.nix b/pkgs/applications/science/biology/samtools/default.nix index ec61e0bd7ce4..29ba667b0552 100644 --- a/pkgs/applications/science/biology/samtools/default.nix +++ b/pkgs/applications/science/biology/samtools/default.nix @@ -18,6 +18,9 @@ stdenv.mkDerivation rec { }) ]; + # tests require `bgzip` from the htslib package + checkInputs = [ htslib ]; + nativeBuildInputs = [ perl ]; buildInputs = [ zlib ncurses htslib ]; |