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* Merge pull request #104632 from r-ryantm/auto-update/blis•••blis: 0.7.0 -> 0.8.0Daniël de Kok2020-11-281-2/+2
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| * blis: 0.7.0 -> 0.8.0R. RyanTM2020-11-221-2/+2
* | Merge pull request #103682 from evils/elvis•••fix some dead meta.homepage entriesPavol Rusnak2020-11-261-1/+1
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| * | openlibm: update meta.homepageEvils2020-11-131-1/+1
* | | Merge pull request #104305 from r-ryantm/auto-update/petsc•••petsc: 3.14.0 -> 3.14.1Sandro2020-11-231-2/+2
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| * | | petsc: 3.14.0 -> 3.14.1R. RyanTM2020-11-191-2/+2
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* | / openlibm: 0.7.2 -> 0.7.3R. RyanTM2020-11-221-2/+2
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* | qcsxcad: migrate to Qt511 + additional cleanup••• * Split into multiple outputs * Rewrite the derivation without stdenv freezeboy2020-11-201-0/+49
* | Merge pull request #104265 from danieldk/sync-cudnn-with-toolkit•••cudnn_cudatoolkit_10: 10.1 -> 10.2Daniël de Kok2020-11-201-1/+1
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| * | cudnn_cudatoolkit_10: 10.1 -> 10.2•••cudatoolkit_10 is currently CUDA 10.2, whereas cudnn_cudatoolkit_10 was using CuDNN with CUDA 10.1. This change rectifies that discrepancy. Daniël de Kok2020-11-191-1/+1
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* / maintainers: create sage team•••Maintaining all the packages whose updates might break some aspect of sage. For reference: https://github.com/NixOS/nixpkgs/pull/103810#issuecomment-727536510 Timo Kaufmann2020-11-1813-13/+13
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* Merge pull request #103120 from danieldk/libtorch-bin-cmake-fix-lib-paths•••libtorch-bin: fix CMake library paths for split outputsDaniël de Kok2020-11-102-0/+9
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| * libtorch-bin: modify passthru test to capture CMake misconfigurationDaniël de Kok2020-11-091-0/+1
| * libtorch-bin: fix CMake library paths for split outputs•••The libtorch CMake files are in the `dev` output and used relative paths to locate the shared libraries. This fails, because the libraries are in the `out` output. This change patches the CMake files to use library paths from `out`. See #102146. Daniël de Kok2020-11-091-0/+8
* | Merge master into staging-nextFrederik Rietdijk2020-11-096-11/+69
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| * Merge pull request #103078 from danieldk/cleanup-libtorch-bin-test•••libtorch-bin: cleanup passthru testDaniël de Kok2020-11-093-9/+18
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| | * libtorch-bin: cleanup passthru test•••- Make passthru.tests an attrset. - Remove CMake VERBOSE option. - Remove spurious `cat CMakeLists.txt`. - Run the test as well. - Actually test some functionality. Daniël de Kok2020-11-073-9/+18
| * | mkl: Add a small test program•••The MKL pkg-config files often change and are then incorrect for our paths. pkg-config validation finds some issues, but not incorrect paths. So, add a small test program to test whether the generated pkg-config files can actually be used to build a functioning binary. Hopefully this catches future regressions. Daniël de Kok2020-11-063-1/+49
| * | mkl: Fix pkg-config file•••There was a spurious `intel64` in some library paths. Daniël de Kok2020-11-061-1/+2
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* | Merge master into staging-nextFrederik Rietdijk2020-11-061-2/+2
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| * petsc: 3.13.4 -> 3.14.0R. RyanTM2020-11-041-2/+2
* | openblas: 0.3.10 -> 0.3.12•••https://github.com/xianyi/OpenBLAS/releases/tag/v0.3.11 https://github.com/xianyi/OpenBLAS/releases/tag/v0.3.12 TredwellGit2020-11-012-34/+2
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* htslib: 1.10.2 -> 1.11 (#100812)Renato Alves2020-10-291-2/+2
* ns-3: 3.30 -> 3.32eyjhb2020-10-281-3/+5
* libtorch-bin: 1.6.0 -> 1.7.0•••Changelog: https://github.com/pytorch/pytorch/releases/tag/v1.7.0 Daniël de Kok2020-10-282-9/+9
* treewide: remove package names from prefix of descriptionsBen Siraphob2020-10-271-1/+1
* openlibm: 0.7.1 -> 0.7.2R. RyanTM2020-10-261-2/+2
* Merge pull request #101031 from r-burns/spooles•••spooles: fix build on darwinRobert Scott2020-10-192-1/+5
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| * spooles: fix build on darwinRyan Burns2020-10-182-1/+5
* | Merge pull request #100870 from r-ryantm/auto-update/brial•••brial: 1.2.8 -> 1.2.10Timo Kaufmann2020-10-181-2/+2
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| * brial: 1.2.8 -> 1.2.10R. RyanTM2020-10-171-2/+2
* | elastix: 5.0.0 -> 5.0.1; unbreak OS X buildBen Darwin2020-10-171-13/+7
* | treewide: remove periods from end of package descriptionsBen Siraphob2020-10-171-1/+1
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* Merge branch 'master' into staging-next•••Quite many rebuilds from master: > Estimating rebuild amount by counting changed Hydra jobs. > 3926 x86_64-darwin > 4645 x86_64-linux Vladimír Čunát2020-10-101-0/+34
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| * Merge pull request #98571 from bcdarwin/gifticlib•••gifticlib: init at unstable-2020-07-07Lassulus2020-10-081-0/+34
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| | * gifticlib: init at unstable-2020-07-07Ben Darwin2020-09-231-0/+34
* | | Merge master into staging-nextFrederik Rietdijk2020-10-084-8/+11
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| * | bicgl: update LIBMINC_DIR due to libminc CMake changesBen Darwin2020-10-061-3/+6
| * | oobicpl: update LIBMINC_DIR due to libminc CMake changesBen Darwin2020-10-061-2/+2
| * | bicpl: fix LIBMINC_DIR due to libminc CMake changesBen Darwin2020-10-061-2/+2
| * | EBTKS: update LIBMINC_DIR due to libminc updateBen Darwin2020-10-061-1/+1
* | | Merge staging-next into stagingFrederik Rietdijk2020-10-062-12/+16
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| * | openblas: enable on ppc64leRyan Burns2020-10-021-0/+7
| * | Merge pull request #98501 from doronbehar/pkg/octave/arpackDoron Behar2020-10-011-12/+9
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| | * | arpack: assert that blas and lapack are compatible•••Do it before buildInputs per: https://github.com/NixOS/nixpkgs/pull/94892#discussion_r471110250 Remove unneed, BLAS_LIBS and LAPACK_LIBS from environment - the libraries are detected just fine when in buildInputs. Doron Behar2020-09-231-4/+6
| | * | arpack: cosmetic changes•••Don't use `with stdenv.lib` at the top of the expression, per: https://nix.dev/anti-patterns/language.html#with-attrset-expression Use rec and version inside `mkDerivation`, like almost any other derivation. Doron Behar2020-09-231-8/+3
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* | / openblas: enable multiple outputsJonathan Ringer2020-10-051-0/+3
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* | Merge pull request #98779 from r-ryantm/auto-update/libbraiding•••libbraiding: 1.0 -> 1.1Timo Kaufmann2020-09-281-2/+2
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| * | libbraiding: 1.0 -> 1.1R. RyanTM2020-09-251-2/+2
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* / cliquer: 1.21 -> 1.22R. RyanTM2020-09-251-2/+2
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