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{
lib,
stdenv,
fetchFromGitHub,
cmake,
zlib,
lz4,
bzip2,
zstd,
spdlog,
tbb_2022,
openssl,
boost,
libpqxx,
clang-tools,
catch2_3,
python3,
doxygen,
fixDarwinDylibNames,
gtest,
rapidcheck,
libpng,
file,
runCommand,
useAVX2 ? stdenv.hostPlatform.avx2Support,
}:
let
rapidcheck' = runCommand "rapidcheck" { } ''
cp -r ${rapidcheck.out} $out
chmod -R +w $out
cp -r ${rapidcheck.dev}/* $out
'';
catch2 = catch2_3;
tbb = tbb_2022;
in
stdenv.mkDerivation rec {
pname = "tiledb";
version = "2.28.1";
src = fetchFromGitHub {
owner = "TileDB-Inc";
repo = "TileDB";
tag = version;
hash = "sha256-Cs3Lr8I/Mu02x78d7IySG0XX4u/VAjBs4p4b00XDT5k=";
};
patches = lib.optionals stdenv.hostPlatform.isDarwin [ ./generate_embedded_data_header.patch ];
# libcxx (as of llvm-19) does not yet support `stop_token` and `jthread`
# without the -fexperimental-library flag. Tiledb adds its own
# implementations in the std namespace which conflict with libcxx. This
# test can be re-enabled once libcxx supports stop_token and jthread.
postPatch = lib.optionalString (stdenv.cc.libcxx != null) ''
truncate -s0 tiledb/stdx/test/CMakeLists.txt
'';
env.TILEDB_DISABLE_AUTO_VCPKG = "1";
# (bundled) blosc headers have a warning on some archs that it will be using
# unaccelerated routines.
cmakeFlags = [
"-DTILEDB_WEBP=OFF"
"-DTILEDB_WERROR=OFF"
# https://github.com/NixOS/nixpkgs/issues/144170
"-DCMAKE_INSTALL_INCLUDEDIR=include"
"-DCMAKE_INSTALL_LIBDIR=lib"
]
++ lib.optional (!useAVX2) "-DCOMPILER_SUPPORTS_AVX2=FALSE";
nativeBuildInputs = [
catch2
clang-tools
cmake
python3
doxygen
]
++ lib.optional stdenv.hostPlatform.isDarwin fixDarwinDylibNames;
buildInputs = [
zlib
lz4
bzip2
zstd
spdlog
tbb
openssl
boost
libpqxx
libpng
file
rapidcheck'
catch2
];
nativeCheckInputs = [
gtest
catch2
];
# test commands taken from
# https://github.com/TileDB-Inc/TileDB/blob/dev/.github/workflows/unit-test-runs.yml
checkPhase = ''
runHook preCheck
pushd ..
cmake --build build --target tests
ctest --test-dir build -R '(^unit_|test_assert)' --no-tests=error
ctest --test-dir build -R 'test_ci_asserts'
popd
runHook postCheck
'';
installTargets = [
"install-tiledb"
"doc"
];
postInstall = lib.optionalString stdenv.hostPlatform.isDarwin ''
install_name_tool -add_rpath ${tbb}/lib $out/lib/libtiledb.dylib
'';
meta = {
description = "Allows you to manage massive dense and sparse multi-dimensional array data";
homepage = "https://github.com/TileDB-Inc/TileDB";
license = lib.licenses.mit;
platforms = lib.platforms.unix;
maintainers = with lib.maintainers; [ rakesh4g ];
};
}
|
