blob: d8a0abf7ac58750deaff792c99e4c87a1a24cd25 (
about) (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
|
{
lib,
buildPythonPackage,
fetchFromGitHub,
setuptools,
matplotlib,
pydicom,
python-dateutil,
pytestCheckHook,
versionCheckHook,
}:
let
deid-data = buildPythonPackage {
pname = "deid-data";
version = "unstable-2022-12-06";
pyproject = true;
build-system = [ setuptools ];
dependencies = [ pydicom ];
src = fetchFromGitHub {
owner = "pydicom";
repo = "deid-data";
rev = "5750d25a5048fba429b857c16bf48b0139759644";
hash = "sha256-c8NBAN53NyF9dPB7txqYtM0ac0Y+Ch06fMA1LrIUkbc=";
};
meta = {
description = "Supplementary data for deid package";
homepage = "https://github.com/pydicom/deid-data";
license = lib.licenses.mit;
maintainers = [ lib.maintainers.bcdarwin ];
};
};
in
buildPythonPackage rec {
pname = "deid";
version = "0.4.0";
pyproject = true;
# Pypi version has no tests
src = fetchFromGitHub {
owner = "pydicom";
repo = "deid";
# the github repo does not contain Pypi version tags:
rev = "14d1e4eb70f2c9fda43fca411794be9d8a5a8516";
hash = "sha256-YsLWHIO6whcBQriMYb0tDD9s/RrxlfeKGORF1UCOilI=";
};
build-system = [ setuptools ];
dependencies = [
matplotlib
pydicom
python-dateutil
];
nativeCheckInputs = [
deid-data
pytestCheckHook
versionCheckHook
];
versionCheckProgramArg = "--version";
pythonImportsCheck = [ "deid" ];
meta = {
description = "Best-effort anonymization for medical images";
mainProgram = "deid";
changelog = "https://github.com/pydicom/deid/blob/${src.rev}/CHANGELOG.md";
homepage = "https://pydicom.github.io/deid";
license = lib.licenses.mit;
maintainers = with lib.maintainers; [ bcdarwin ];
};
}
|
